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   <channel>
      <title>Life of a Lab Rat</title>
      <link>http://blogs.usyd.edu.au/labrats/</link>
      <description></description>
      <language>en</language>
      <copyright>Copyright 2008</copyright>
      <lastBuildDate>Thu, 26 Jun 2008 09:30:00 +1000</lastBuildDate>
      <generator>http://blogs.usyd.edu.au/</generator>
      <docs>http://blogs.usyd.edu.au/</docs> 

            <item>
         <title>ta-ra for now</title>
         <description><![CDATA[<p>Right.  I'm off to a Gordon Conference.  </p>

<p>I might write a few things while I'm away, depending on (a) if anything funny happens and (b) if I have time/energy.  If not, see you in about 10 days.</p>

<p>BK xx</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/tara_for_now.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/tara_for_now.html</guid>
         <category>Meta</category>
         <pubDate>Thu, 26 Jun 2008 09:30:00 +1000</pubDate>
      </item>
            <item>
         <title>Important notices</title>
         <description><![CDATA[<blockquote>Now that three noticeboard have been installed near the lifts on every floor
in our building, we will be populating them soon with informative
materials.</blockquote>

<p>Such as, presumably, <em>Don't use the lifts unless you're happy to be stuck in them for a while</em>.</p>

<p>Anyway,</p>

<blockquote>
1. The notice board with perspex cover on the right will have OH&S info
together with Emergency procedures and contacts

<p>2. The notice board in the middle with perspex cover will have a floor plan<br />
with room numbers and a directory of those whi occupy these rooms</p>

<p>3. The notice board on the left without the perspex cover will carry<br />
temporary notices for general use that will be removed on a regular basis.<br />
</blockquote></p>

<p>These will be the perspex covers of which two (at least) were screwed on so tight that this morning, before any notices went in them, they were already broken.</p>

<p>I like the implication that the notices that are actually useful or interesting will be removed on a regular basis, and are not protected by (broken) perspex.  Given the state of our lifts and air-conditioning, we're not really surprised.</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/important_notices.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/important_notices.html</guid>
         <category>Workplace</category>
         <pubDate>Mon, 23 Jun 2008 16:59:10 +1000</pubDate>
      </item>
            <item>
         <title>That word does not mean what you think it does</title>
         <description><![CDATA[<p>What do the words <em>chthonic</em>, <em>eldritch</em> and <em>preternatural</em> have in common?</p>

<p>Some Lovecraftian opening sentence, perhaps?  An obscene mélange of tentacles and Welshmen?</p>

<p>No — but then again, maybe yes.  They all occur in a <em>News and Views</em> item in today's <em><a href="http://www.nature.com/nature/journal/v453/n7198/full/453999a.html">Nature</a></em>, by that Senior Editor and master of purple prose, <a href="http://network.nature.com/blogs/user/henrygee">Henry Gee</a>.  What's more, they got there as a result of a <a href="http://forums.lablit.com/viewtopic.php?f=11&t=2793&p=13147#p13147">bet</a>, upon which was riding a hug and a pint.</p>

<p>From the top, then:</p>

<blockquote>But with [the] publication [...] of the draft genome sequence of Branchiostoma floridae, one of the 25 or so recognized species of amphioxus, this <strong>eldritch</strong> organism is set to re-enter public life.</blockquote>

<blockquote>The age of genomics has rescued the amphioxus from <strong>chthonic</strong> obscurity, as new data</blockquote>

<blockquote> Such studies reveal the amphioxus genome to be, in fact, of <strong>preternatural</strong> importance</blockquote>

<p>A round of applause is called for.  You don't get <a href="http://forums.lablit.com/viewtopic.php?f=8&t=2796&p=13137#p13137">philosophers</a> of science talking about this sort of japing, do you?<br />
</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/that_word_does_not_mean_what_y.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/that_word_does_not_mean_what_y.html</guid>
         <category>Friday Afternoon</category>
         <pubDate>Thu, 19 Jun 2008 09:30:00 +1000</pubDate>
      </item>
            <item>
         <title>Alive and kicking</title>
         <description><![CDATA[<p>I've been researching and writing a topic for a book chapter. This has been quite a bit of work — it's in a field with which I am vaguely familiar but there are lots of subtleties and gotchas — and has completely sucked my lab time away. A book chapter is nice, but sometimes I wonder whether I'm going to use all these hard-earned gobbets of information, wrested from the fires of PubMed: or even if anyone's going to read the damn thing and take something positive away from it.</p>

<p>I enjoy writing, and I enjoy learning new things, but sometimes you just need to go away and clone something.  Anything.  The first draft will be done this weekend, and then I can have a proper look at the microarray data that arrived this week. This week?  Last week.  I don't know.  There was a long weekend somewhere, I remember that.</p>

<p>These microarray data are <em>interesting</em>. They're not in total accord with the first batch I did last year, which is actually quite reassuring because Beta Gal isn't haven't much luck getting data that are consistent with what they told us.  Which means, and this is good or bad depending on the angle you approach it from, that I have to re-do about a month's worth of analysis.</p>

<p>In seven days.  Because <em>then</em> I have to make a poster for a conference.</p>

<p>So.  Yeah.  A couple of extra days, please.  Might make a difference. </p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/alive_and_kicking.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/alive_and_kicking.html</guid>
         <category>Science</category>
         <pubDate>Fri, 13 Jun 2008 21:00:00 +1000</pubDate>
      </item>
            <item>
         <title>Always take the weather</title>
         <description><![CDATA[<p>It's been rather damp in Sydney for the last week.  And of course the locals say to me,</p>

<p>"Hur hur, it must feel like home with all this rain!"</p>

<p>So I point out that, actually, Sydney gets <em>more</em> rain than I'm used to.</p>

<p>Seriously.  The thirty year mean annual rainfall in Cambridge (UK.  What?  There's another one?) is ~550 mm (<a href="http://www.metoffice.gov.uk/">source</a>).  On average it rains on 106 days a year.  In Sydney the annual rainfall, averaged over 150 years (look, when you don't have much recorded history you make the most of it) is ~1200 mm (<a href="http://www.bom.gov.au/">source</a>).  That's <em>over twice as much</em>. And the number of rainy days per year?  An even hundred.</p>

<p>Same number of rainy days, twice as much rain.  Now tell me it should remind me of home.</p>

<p>Just for comparison, I checked the annual figures for Manchester (806 mm), Oxford (642 mm), Auckland (1150 mm), Canterbury Plains (the driest place in New Zealand: 635 mm), Jerusalem (660 mm) and New York (1140 mm).</p>

<p>The interesting difference is that Sydney has 50% more sunshine hours than Cambridge.  So when it's cloudy in Cambridge, it might not rain — or it might snow.  In Sydney clouds mean rain.  And an imperial shedload of it.</p>

<p><br />
</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/always_take_the_weather.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/always_take_the_weather.html</guid>
         <category>Stranger in a strange land</category>
         <pubDate>Sat, 07 Jun 2008 18:00:00 +1000</pubDate>
      </item>
            <item>
         <title>Pretty</title>
         <description><![CDATA[<p>Oh, these <a href="http://exploringorigins.org/resources.html">movies</a> by <a href="http://www.onemicron.com/">Janet Iwasa</a> are rather splendid.</p>

<p>Lots of pretty pictures, too.</p>

<p><img src="http://exploringorigins.org/images/nucleicAcidImage.jpg" alt="something molecular" /></p>

<p>(HT: <a href="http://biocurious.com/origin-of-life-now-in-video-form">Biocurious</a>)</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/pretty.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/pretty.html</guid>
         <category>Arts</category>
         <pubDate>Fri, 06 Jun 2008 09:45:00 +1000</pubDate>
      </item>
            <item>
         <title>It&apos;s only natural...</title>
         <description><![CDATA[<p>By the time you read this, this envelope<br />
<a href="http://blogs.usyd.edu.au/labrats/images/nature_ac.jpg"><img alt="nature_ac.jpg" src="http://blogs.usyd.edu.au/labrats/images/nature_ac-thumb.jpg" width="200" height="101" /></a><br />
will be safe (I hope) in the bowels of <a href="http://audrasaustralianadventures.blogspot.com/2008/05/about-australia-post.html">Australia Post</a>.</p>

<p>I'll tell you more about it when I have a publication date (and before you ask: No, unfortunately it's not peer-reviewed).</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/its_only_natural.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/its_only_natural.html</guid>
         <category>Arts</category>
         <pubDate>Thu, 05 Jun 2008 20:00:00 +1000</pubDate>
      </item>
            <item>
         <title>Fail</title>
         <description><![CDATA[<p>We often get emails from potential PhD students from the Indian sub-continent.  These are generally quite amusing: I know it's in poor taste to giggle at unintentional language abuse but when your knockouts haven't worked for the umpteenth time and your feet are soggy because it's been raining for a week (and yet we <em>still</em> suffer under water restrictions) then you have to take your entertainment where and when you can get it.</p>

<p>However.</p>

<p>There is a world of difference between writing pidgin English because she is not your first language (and don't get me wrong: English is herself a pidgin, Britannia's bastard offspring who does not care from whom she steals vocabulary.  Therein lies her strength), and being a <a href="http://ricardipus.blogspot.com/2008/06/as-per-your-request.html">muppet</a>:</p>

<blockquote>
Dear [alternate name for Ricardipus]. 

<p>I went thru your profile and found ur connection in academics. I want to do PhD. I have scholarship of US $100,000 and wants a PhD position in Canada. Can you help me.<br />
</blockquote></p>

<p>Ur, as <a href="http://www.mnsu.edu/emuseum/archaeology/sites/middle_east/ur.html">everyone knows</a>, was a city in Mesopotamia.  It would have been over 6,000 miles from Canada.</p>

<p><br />
</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/fail.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/fail.html</guid>
         <category>Students</category>
         <pubDate>Thu, 05 Jun 2008 11:00:00 +1000</pubDate>
      </item>
            <item>
         <title>All the right words...</title>
         <description><![CDATA[<p>... just not necessarily in the right order.</p>

<p>Email from HR:</p>

<blockquote>
The Federal Government made changes to the FBT status of laptops, PDAs and other items in the Federal Budget on 13 May 2008. The changes call into question the ability of the University to continue to offer packaging for these items.

<p>We are currently reviewing the impact of the changes, but, in the meantime, the University must cease all salary packaging of laptop computers, PDAs and other items purchased after the budget changes until further notice.<br />
</blockquote></p>

<p>I don't think that <em>salary packaging</em> really means that HR are going to come round with brand new laptops wrapped in in crisp fivers every second Thursday.  Or that they have been doing it and now they can't.  Or that they're going to pay us in those Cheeto-style chips you find in every Sigma box.  At least I hope not.</p>

<blockquote>
Laptop computers, PDAs and other items purchased before the budget changes (on 13 May) may still be packaged. However, you need to arrange and finalise the salary packaging of these items as soon as possible.
</blockquote>

<p>Look, <em>I'll</em> tinker with the very nature of life itself, <em>you</em> look after the accounts.  Do we have a deal?  (Oh, and for pity's sake when will Australia <strong>grow the chuff up</strong> and learn to use -ize like the rest of the world?)</p>

<blockquote>Your patience and understanding is appreciated. </blockquote>

<p>If I had either, then you'd be welcome.</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/all_the_right_words.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/all_the_right_words.html</guid>
         <category>The things people say</category>
         <pubDate>Thu, 05 Jun 2008 06:00:00 +1000</pubDate>
      </item>
            <item>
         <title>A cleansing experience</title>
         <description><![CDATA[<p>I'm going to a <a href="http://www.grc.org/programs.aspx?year=2008&program=posttran">Gordon Conference</a> at the end of the month.  That's essential a pretty <a href="http://www.grc.org/about.aspx">hardcore</a> scientific conference, with a full programme and lots of very clever people in attendance (and me).  This particular meeting is at Colby College, Maine, which is in the middle of bloody <a href="http://maps.google.com/maps?ll=44.566072,-69.661233&z=15&t=h&hl=en">nowhere</a>.</p>

<p>Seeing as I'd have to break the journey anyway (because trans-Pacific flights arrive on the Eastern seaboard at stupid times), and overnight either in Boston or New York going up and coming back, I've decided to take an extra day and do the tourist thing.  It doesn't help that the conference finishes on the 4th July, which is some kind of public holiday or party in the US.  I might see if I can see fireworks anywhere and ask what's going on in my best English accent.</p>

<p>So.  It took me about half an hour to write the abstract and a similar amount of time to create the application online.  The Black Queen spent Thursday afternoon looking for flights, then I took over and spent all day Friday trying to juggle connections and whatnot, finally making bookings Friday night.  On the weekend I rested (actually, I didn't: but that's a story for somewhere else).  Monday morning I figured out the hotels I'd need, and since then I've been banging my head against the completely arcane and impenetrable accounting system in order to get approval for the money I've already spent on the corporate card for the flights, and to make a claim for the hotel bills that have to be paid in advance and  have had to come off my own credit card.</p>

<p>It's a bloody nightmare.  You've got to do all these things in the right order, and you can't click 'save' until you've got all the information: if you hit 'submit' too soon it shoots off to get approved and you have to winkle it back out (easy to cock this one up — the buttons aren't labelled in any meaningful fashion) — and if, because you like to multi-task, you decide to open a claim for one sort of expense while working on a travel requisition then the second opens in the first window (not in a new tab, no, that would be <em>sensible</em>) and you lose everything you've done up to that point because you can't hit save yet.</p>

<p>My travel requisition might be a little <em>terse</em> for that reason. </p>

<p>Anyway, I got it  done, and if I haven't checked all the right boxed or filled in every last detail I'm sure someone in admin will scream and shout.  Fine.</p>

<p>After all that I went into the lab and buffered some phenol/chloroform.  It was comforting.  The semi-ester scent of isoamyl alcohol purified my senses.  When people saw me in labcoat, gloves and safety specs they <em>knew</em> I was doing something dangerous.  And real.</p>

<p>It felt good to be alive.</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/06/a_cleansing_experience.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/06/a_cleansing_experience.html</guid>
         <category>Conferences</category>
         <pubDate>Tue, 03 Jun 2008 14:00:00 +1000</pubDate>
      </item>
            <item>
         <title>Time to switch</title>
         <description><![CDATA[<p>I reckon I should retrain.</p>

<p>The average salary (average!) for a radiologist <a href="http://www.theaustralian.news.com.au/story/0,,23771424-2702,00.html">appears to be</a> Au$600k.  Yes you read that right, six hundred thousand (~quarter million, Sterling).</p>

<p>Or maybe mining.</p>

<blockquote>A north Queensland recruitment agency said there was huge pay growth across the whole spectrum of professions in the region, not just the mining and engineering sectors. </blockquote>

<p>When PAs are <em>recruited</em> at substantially more than I earn, fourteen years after completing my doctorate, you might understand why we scientists are a little <a href="http://blogs.usyd.edu.au/labrats/2008/05/all_i_ask_is_a_tall_sheep.html">sensitive</a> about money.</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/05/time_to_switch.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/05/time_to_switch.html</guid>
         <category>Evil</category>
         <pubDate>Wed, 28 May 2008 12:30:00 +1000</pubDate>
      </item>
            <item>
         <title>Self-fulfilling prophesy</title>
         <description><![CDATA[<p><a href="http://blogs.usyd.edu.au/labrats/2008/05/inappropriate_behaviour_part_2.html">My</a> <a href="http://blogs.usyd.edu.au/labrats/2008/05/inappropriate_behaviour.html">comments</a> on sexism have obviously been taken to heart.  There have been witterings from certain male students about 'roosters' and 'hen pens'.  One of the female students has hit back, with a commentary on a <em>Far Side</em> cartoon that went up on the whiteboard:</p>

<p><img alt="An axe for the rooster" src="http://blogs.usyd.edu.au/labrats/images/chickens.jpg" width="400" height="581" /></p>

<p>And while I have your attention. . .</p>

<p>FSP has an interesting piece on "<a href="http://science-professor.blogspot.com/2008/05/sexism-driven-science.html">Sexism-driven science</a>", <br />
and this email (about indoor <strike>football</strike> soccer made me laugh (emphasis mine):</p>

<blockquote>We need more girls so <em>everyone is welcome</em>.</blockquote>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/05/selffulfilling_prophesy.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/05/selffulfilling_prophesy.html</guid>
         <category>Cow-orkers</category>
         <pubDate>Tue, 27 May 2008 11:15:00 +1000</pubDate>
      </item>
            <item>
         <title>Things you didn&apos;t know about scientists (and probably wished that were still so) #3</title>
         <description><![CDATA[<p>You can spot a protein chemist/molecular biologist who is also a parent by his or her reaction to the smell of bugs grown in <a href="http://www.mrc-lmb.cam.ac.uk/ms/methods/protein/nmr.html">minimal media</a>.</p>

<p>Your non-parent will probably say "Ew, stinky" with a side-order of an attempt at description.  The parent, on the other hand, will immediately file the smell alongside breast-fed baby's nappy.  The nappies that look like they have mustard or sesame seeds in them.</p>

<p>Aren't you glad this weblog isn't scratch 'n' sniff?</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/05/things_you_didnt_know_about_sc_2.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/05/things_you_didnt_know_about_sc_2.html</guid>
         <category>Experiments</category>
         <pubDate>Mon, 26 May 2008 13:00:00 +1000</pubDate>
      </item>
            <item>
         <title>All I ask is a tall sheep</title>
         <description><![CDATA[<p>Those of you not in this business possibly do not realize how outrageously expensive is the actual doing of science.  In the same way that <a href="http://www.stopdown.net/med%20$%20Cal%20disclosure%20wsj.htm">medicine</a> is (<a href="http://www.citynews.ca/news/news_9842.aspx">artificially</a>) <a href="http://www.independent.co.uk/life-style/health-and-wellbeing/health-news/drug-firms-told-to-cut-ripoff-prices-by-45-719071.html">expensive</a>, suppliers of chemicals and equipment to scientists are ripping us off.  And it's worse in Australia — there is a stupendous markup that is not accounted for by the obvious extra expense of shipping and storage.</p>

<p>The Black Queen last week discovered that by the simple expedient of sourcing certain not uncommon (and certainly not patented!) chemicals directly from a supplier in the US rather than a multinational distributor of <strike>exorbitantly-priced</strike> gear with a warehouse in Australia (mentioning no names, but think non-amateur times ten to the sixth), we can save about 12,000 dollars over six months to a year.  Including shipping.  Twelve grand!  And we're not exactly a process lab — nor a manufacturing one.</p>

<p>It's good news for the lab, not least because I'm about to blow another 4 grand on these blasted <a href="http://blogs.usyd.edu.au/labrats/2007/10/freak_of_nature.html">microarrays</a>.  I'm also going to a <a href="http://www.grc.org/programs.aspx?year=2008&amp;program=posttran">conference</a> in Maine at the end of June, the plane tickets for which — for some unfathomable reason — are going to cost more than the tickets I've just bought for <a href="http://network.nature.com/group/sciblog2008">London</a>.</p>

<p>So every penny helps.  Swings, roundabouts, etc.</p>

<p>Anyway.  I have, he declared grandiloquently, A Plan.</p>

<p><img src="http://upload.wikimedia.org/wikipedia/commons/e/e3/USCG_Eagle.jpg" alt="A tall sheep" width="400" height="269"></p>

<p>You see, as the globe, because of the internets, keeps getting smaller, the price of actually oil keeps going up, making travel <em>more</em> expensive.  Then there's global warming, fossil fuels are running out, omigodwereallgoingtodie etc., which is only going to make conferences and collaborations more difficult, especially stuck out here on the A E of N.  So I'm going to <strike>do over a bank</strike> apply for money to construct a small fleet of <a href="http://www.youngendeavour.gov.au/site/">tall ship</a>s on which there will be ultra modern labs and a helipad for emergency supplies.  We'll cruise the world, working hard, collaborating with anyone who has money but a green conscience, immediately and imminently in touch with everyone via our satellite uplink.</p>

<p>Oh, and a couple of these in case <strike>Promega</strike><strike>Qiagen</strike> pirates show up.<br />
<img src="http://upload.wikimedia.org/wikipedia/commons/b/ba/USS_Gerald_R._Ford.jpg" alt="Gerald R Ford class carrier" width="400" height="300"><br />
</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/05/all_i_ask_is_a_tall_sheep.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/05/all_i_ask_is_a_tall_sheep.html</guid>
         <category>The Bleeding Edge</category>
         <pubDate>Mon, 26 May 2008 06:00:00 +1000</pubDate>
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            <item>
         <title>Procedural Notice</title>
         <description><![CDATA[<p>For reasons that may or may not be important, memorable, or even strictly adhered to, I'm going to try to divide the types of posts that I write here and at the <a href="http://network.nature.com/blogs/user/rpg">other place</a> (my anonymity was always pretty precarious, yeah?).</p>

<p>Here I'll concentrate more on the doing of the science, funny things that happen <strike>on the way to the forum</strike> and basically 'outreach' — talking to you folks who do other things than tinker with the very fabric of the created order for a living.</p>

<href="http://network.nature.com/blogs/user/rpg">There</a>, I think I'm going to think more about Web 2.0, networking and vodka.  And 'hard' science.

<p>And to keep things simple, <a href="http://network.nature.com/blogs/user/rpg/2008/05/25/on-the-nature-of-networking">this</a> is the last time I'll link to posts over there.  Sign up to the <a href="http://network.nature.com/blogs/feed/rpg">RSS</a> if you're interested.</p>]]></description>
         <link>http://blogs.usyd.edu.au/labrats/2008/05/procedural_notice.html</link>
         <guid>http://blogs.usyd.edu.au/labrats/2008/05/procedural_notice.html</guid>
         <category>Meta</category>
         <pubDate>Sun, 25 May 2008 19:31:14 +1000</pubDate>
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